hdf5_2_dataframe
Fri Feb 14 2025 16:48:07 GMT+0000 (Coordinated Universal Time)
Saved by
@mmare
import pandas as pd
# Function to extract HDF5 content into a Pandas-friendly format
def extract_hdf5_to_dataframe(hdf5_path):
with h5py.File(hdf5_path, "r") as hdf5_file:
data_dict = {}
def recursively_load_hdf5(group, path=""):
for key, item in group.items():
new_path = f"{path}/{key}" if path else key
if isinstance(item, h5py.Dataset):
data_dict[new_path] = item[()]
elif isinstance(item, h5py.Group):
recursively_load_hdf5(item, new_path)
recursively_load_hdf5(hdf5_file)
df = pd.DataFrame(list(data_dict.items()), columns=["Path", "Value"])
return df
# Extract and display HDF5 content
hdf5_preview_df = extract_hdf5_to_dataframe(hdf5_file_path)
import ace_tools as tools
tools.display_dataframe_to_user(name="HDF5 Preview", dataframe=hdf5_preview_df)
content_copyCOPY
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