Give Docker the access to display (XServer?)

ip addr | grep eth0 | grep inet | awk '{print $2}' | awk -F '/' '{print $1}' | awk '{printf "%s:3000", $0}' | clip.exe

curl -fsSL https://deb.nodesource.com/setup_current.x | sudo -E bash -
sudo apt-get install -y nodejs

# install docker
sudo apt-get install docker.io

# create and run a container from an image from the Docker Hub
sudo docker run --name firstContainer ubuntu:latest # where firstContainer is the name of the container

# list locally available docker containers
sudo docker ps -a

# open a docker container in interactive mode in the terminal
sudo docker run -it --name myContainer ubuntu:latest # where myContainer is the container name
# you can exit the container by pressing CTRL+P and CTRL+Q

# attach container to terminal
sudo docker attach myContainer # the container will now stay open in the background even after exiting via CTRL+P and CTRL+Q

# execute commands in the container running in the background
sudo docker exec myContainer echo $PATH

# delete containers
sudo docker rm -f firstContainer myContainer

# create new docker image based on your local environment/container
sudo docker commit myNginx docker_id/image_name # where myNginx is the name of your currently running container

# create new docker container from an image from a previously committed image
sudo docker run -it --name nginxNew docker_id/image_name

# list images on your machine
sudo docker image ls

# login to your docker hub account from the terminal
sudo docker login # you will be prompted to enter your id and password

# push an image to docker hub when logged into your docker account
sudo docker push docker_id/image_name

# run a docker container in the background
sudo docker run -d --name myApp nginx

# start an interactive bash terminal for the container running in the background
sudo docker exec -it myApp bashapt-get

# stop a running container
sudo docker stop myApp

# start a stopped container again
sudo docker start myApp

use Drupal\Core\DrupalKernel;
use Symfony\Component\HttpFoundation\Request;

if (PHP_SAPI !== 'cli') {
  return;
}

if (version_compare(PHP_VERSION, '5.4.5') < 0) {
  $version = PHP_VERSION;
  echo <<<EOF

ERROR: This script requires at least PHP version 5.4.5. You invoked it with
       PHP version {$version}.
\n
EOF;
  exit;

Esc # exit insert mode
:wq | :x # write and quit

gunzip -c /Users/sethshapiro/Downloads/20210305-KochavaTransactions000000000000.gz | awk 'NR==1 {print; exit}'

#!/bin/bash

if [ ! -f composer.json ]; then
    echo "Please make sure to run this script from the root directory of this repo."
    exit 1
fi

composer install
cp .env.example .env
php artisan key:generate
source "$(dirname "$0")/checkout_latest_docs.sh"
npm install
npm run dev

gzip -v -t file.gz

/home/rezaeir/canu-2.1.1/bin/canu -p lambda -d lambda-assembly genomeSize=50000 -nanopore-raw lambda_subsample.fastq.gz

rasusa --input control_lambda_7_2_2021.fastq.gz --coverage 30 --genomes-size 50000 --output lambda_subsample.fastq.gz

cat *.fastq.gz > control_lambda_7_2_2021.fastq.gz

./guppy_basecaller --compress_fastq -i <input dir> -s <output dir> --flowcell FLO-MIN106 --kit SQK-LSK109 -x "cuda:0" --gpu_runners_per_device 4 --num_callers 4 --chunks_per_runner 2048 --barcode_kits "EXP-NBD104" --trim_barcodes

for file in *
do
file=${file//.bam/}
samtools sort -@ 14 $file.bam > $file.sorted.bam
samtools index -@ 14 -b $file.sorted.bam
samtools idxstats -@ 14 $file.sorted.bam > $file.idxstats.txt
done

#!/usr/bin/env python3
import sys
import subprocess

with open(sys.argv[1]) as f:
        for line in f:
                old_name = line.strip()
                new_name = old_name.replace("jane","jdoe")
                subprocess.run(["mv",old_name,new_name])
        f.close()

#!/bin/bash

>oldFiles.txt
files=$(grep " jane " ../data/list.txt | cut -d ' ' -f 3)
for file in $files; do
        if [ -e $HOME$file ]; then
        echo $HOME$file >> oldFiles.txt;
        fi
done